STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7959_1625Unannotated protein. (107 aa)    
Predicted Functional Partners:
C7959_12342
Unannotated protein.
  
 0.854
C7959_12318
Unannotated protein.
  
 0.854
ribBA
Unannotated protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
 0.765
C7959_10145
Unannotated protein; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
 
 0.749
C7959_1126
Unannotated protein.
   
 
 0.737
groL
Unannotated protein; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
   
 
 0.729
C7959_14711
Unannotated protein; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
 
 0.708
C7959_12049
Unannotated protein.
    
 
 0.677
fusA
Unannotated protein; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.
    
 
 0.677
C7959_10786
Unannotated protein.
    
 0.667
Your Current Organism:
Orenia marismortui
NCBI taxonomy Id: 926561
Other names: O. marismortui DSM 5156, Orenia marismortui DSM 5156
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.