STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV32343.1Hypothetical protein. (156 aa)    
Predicted Functional Partners:
AEV32341.1
PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.
  
    0.795
AEV32342.1
Hypothetical protein.
       0.773
AEV33920.1
PFAM: Gram-negative bacterial tonB protein.
  
     0.614
AEV32759.1
Periplasmic protein TonB, links inner and outer membranes.
  
     0.570
AEV32340.1
Transketolase, alpha subunit; PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain.
       0.564
AEV32338.1
Transketolase, beta subunit; PFAM: Transketolase, thiamine diphosphate binding domain.
       0.558
AEV32339.1
Mg-chelatase subunit ChlD; PFAM: von Willebrand factor type A domain.
       0.546
AEV32889.1
TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain.
  
     0.529
AEV31944.1
Hypothetical protein.
  
     0.526
AEV32586.1
Hypothetical protein.
 
     0.517
Your Current Organism:
Owenweeksia hongkongensis
NCBI taxonomy Id: 926562
Other names: Cryomorphaceae bacterium UST20020801, O. hongkongensis DSM 17368, Owenweeksia hongkongensis DSM 17368, Owenweeksia hongkongensis UST20020801
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.