STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV33009.1Putative sugar isomerase; PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: L-rhamnose catabolism isomerase, Pseudomonas stutzeri subtype. (424 aa)    
Predicted Functional Partners:
AEV33010.1
PFAM: FGGY family of carbohydrate kinases, N-terminal domain.
  
 0.995
AEV33008.1
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; PFAM: Class II Aldolase and Adducin N-terminal domain; short chain dehydrogenase; TIGRFAM: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
 
     0.924
AEV33007.1
Putative transcriptional regulator; PFAM: Bacterial regulatory proteins, gntR family.
 
     0.818
AEV33011.1
Fe-S oxidoreductase; PFAM: Cysteine-rich domain.
       0.793
AEV33012.1
(4Fe-4S) cluster-containing protein; PFAM: Uncharacterised ACR, YkgG family COG1556; TIGRFAM: iron-sulfur cluster-binding protein.
       0.793
AEV33013.1
Hypothetical protein; PFAM: Uncharacterised ACR, YkgG family COG1556.
       0.793
AEV33004.1
PFAM: F5/8 type C domain; Glycosyl hydrolases family 2, sugar binding domain; Belongs to the glycosyl hydrolase 2 family.
 
     0.660
AEV33006.1
PFAM: L-rhamnose-proton symport protein (RhaT).
 
     0.610
AEV33014.1
Biopolymer transport protein; PFAM: MotA/TolQ/ExbB proton channel family.
       0.409
AEV33015.1
Hypothetical protein.
       0.404
Your Current Organism:
Owenweeksia hongkongensis
NCBI taxonomy Id: 926562
Other names: Cryomorphaceae bacterium UST20020801, O. hongkongensis DSM 17368, Owenweeksia hongkongensis DSM 17368, Owenweeksia hongkongensis UST20020801
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.