STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000515355_00076Unannotated protein. (293 aa)    
Predicted Functional Partners:
GCA_000515355_00468
Unannotated protein.
  
   0.895
GCA_000515355_05520
Unannotated protein.
  
 
 0.893
GCA_000515355_00825
Unannotated protein.
   
 
 0.855
GCA_000515355_00077
Unannotated protein.
       0.677
GCA_000515355_04329
Unannotated protein.
     
 0.644
GCA_000515355_00078
Unannotated protein.
  
    0.523
GCA_000515355_02180
Unannotated protein.
      
 0.445
Your Current Organism:
Promicromonospora kroppenstedtii
NCBI taxonomy Id: 926564
Other names: P. kroppenstedtii DSM 19349, Promicromonospora kroppenstedtii DSM 19349, Promicromonospora kroppenstedtii RS16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.