STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000515355_00197Unannotated protein. (204 aa)    
Predicted Functional Partners:
GCA_000515355_04880
Unannotated protein.
  0.979
GCA_000515355_05016
Unannotated protein.
  0.940
GCA_000515355_03612
Unannotated protein.
  0.928
GCA_000515355_04421
Unannotated protein.
  0.928
GCA_000515355_03251
Unannotated protein.
 
   
  0.867
GCA_000515355_05819
Unannotated protein.
 
   
  0.821
GCA_000515355_05199
Unannotated protein.
 
 
 0.798
GCA_000515355_04882
Unannotated protein.
  
  0.792
GCA_000515355_04758
Unannotated protein.
  
  0.788
GCA_000515355_05923
Unannotated protein.
   
 
 0.772
Your Current Organism:
Promicromonospora kroppenstedtii
NCBI taxonomy Id: 926564
Other names: P. kroppenstedtii DSM 19349, Promicromonospora kroppenstedtii DSM 19349, Promicromonospora kroppenstedtii RS16
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.