STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000515355_01061Unannotated protein. (330 aa)    
Predicted Functional Partners:
GCA_000515355_01060
Unannotated protein.
       0.773
GCA_000515355_01108
Unannotated protein.
  
     0.608
GCA_000515355_01059
Unannotated protein.
       0.584
GCA_000515355_01505
Unannotated protein.
  
     0.567
GCA_000515355_01062
Unannotated protein.
       0.551
GCA_000515355_05750
Unannotated protein.
  
     0.527
GCA_000515355_01063
Unannotated protein.
 
     0.488
GCA_000515355_02739
Unannotated protein.
  
     0.485
GCA_000515355_04192
Unannotated protein.
  
     0.476
GCA_000515355_05749
Unannotated protein.
  
     0.470
Your Current Organism:
Promicromonospora kroppenstedtii
NCBI taxonomy Id: 926564
Other names: P. kroppenstedtii DSM 19349, Promicromonospora kroppenstedtii DSM 19349, Promicromonospora kroppenstedtii RS16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.