STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000515355_05649Unannotated protein. (507 aa)    
Predicted Functional Partners:
GCA_000515355_02049
Unannotated protein.
   
  0.941
GCA_000515355_03395
Unannotated protein.
 
 
 0.925
GCA_000515355_05648
Unannotated protein.
 
 
  0.897
GCA_000515355_02189
Unannotated protein.
  
 
 0.855
GCA_000515355_05428
Unannotated protein.
 
 
  0.813
GCA_000515355_05447
Unannotated protein.
  
  
 
0.764
GCA_000515355_03396
Unannotated protein.
  
 
 0.762
GCA_000515355_00659
Unannotated protein.
  
  
 
0.743
GCA_000515355_01693
Unannotated protein.
 
 
 
 0.743
GCA_000515355_01803
Unannotated protein.
   
 
 0.743
Your Current Organism:
Promicromonospora kroppenstedtii
NCBI taxonomy Id: 926564
Other names: P. kroppenstedtii DSM 19349, Promicromonospora kroppenstedtii DSM 19349, Promicromonospora kroppenstedtii RS16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.