STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL86896.1PFAM: Glycosyl transferase family 2. (242 aa)    
Predicted Functional Partners:
AFL86895.1
Hypothetical protein.
 
   
 0.948
AFL86897.1
PFAM: Nodulation protein S (NodS).
 
     0.946
AFL86898.1
Putative LmbE-like protein; PFAM: GlcNAc-PI de-N-acetylase.
 
    0.928
AFL90248.1
PFAM: Uncharacterized protein conserved in bacteria (DUF2256); Protein of unknown function (DUF3253).
  
     0.603
AFL89508.1
Hypothetical protein; Manually curated.
  
     0.536
AFL86894.1
PFAM: Protein of unknown function (DUF3738); TIGRFAM: Solibacter paralogous family TIGR03435.
       0.489
AFL86899.1
PFAM: Uncharacterized protein conserved in bacteria (DUF2251).
       0.481
AFL90128.1
Putative stress protein (general stress protein 26); PFAM: Pyridoxamine 5'-phosphate oxidase.
  
     0.465
Your Current Organism:
Terriglobus roseus
NCBI taxonomy Id: 926566
Other names: T. roseus DSM 18391, Terriglobus roseus DSM 18391
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.