STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL87563.1PFAM: Polysaccharide biosynthesis/export protein; SLBB domain. (211 aa)    
Predicted Functional Partners:
AFL87561.1
Uncharacterized protein involved in exopolysaccharide biosynthesis; PFAM: Chain length determinant protein; TIGRFAM: polysaccharide chain length determinant protein, PEP-CTERM locus subfamily.
 
 
 0.965
AFL87762.1
PFAM: Polysaccharide biosynthesis/export protein.
  
  
  0.961
AFL87763.1
Capsular exopolysaccharide biosynthesis protein; PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family.
 
 
 0.953
AFL87560.1
PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
 
 
 0.929
AFL88023.1
PFAM: Polysaccharide biosynthesis/export protein.
  
  
 
0.926
AFL87027.1
PFAM: SLBB-domain like (DUF1017); Polysaccharide biosynthesis/export protein; SLBB domain.
  
  
 
0.922
AFL89057.1
PFAM: Polysaccharide biosynthesis/export protein; SLBB domain; TIGRFAM: putative polysaccharide export protein, PEP-CTERM sytem-associated.
  
  
 
0.916
AFL89059.1
Uncharacterized protein involved in exopolysaccharide biosynthesis; PFAM: Chain length determinant protein; TIGRFAM: polysaccharide chain length determinant protein, PEP-CTERM locus subfamily.
 
 
 0.859
AFL87942.1
PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.827
AFL87821.1
PFAM: Bacterial sugar transferase; TIGRFAM: Undecaprenyl-phosphate galactose phosphotransferase, WbaP; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.818
Your Current Organism:
Terriglobus roseus
NCBI taxonomy Id: 926566
Other names: T. roseus DSM 18391, Terriglobus roseus DSM 18391
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.