STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL87677.1Fucose permease. (405 aa)    
Predicted Functional Partners:
AFL87675.1
ATP-dependent exonuclase V beta subunit, helicase and exonuclease domain-containing; PFAM: UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily.
  
    0.746
AFL87676.1
TIGRFAM: probable DNA repair protein.
       0.727
AFL90347.1
Hypothetical protein; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence.
  
     0.624
AFL86623.1
Hypothetical protein.
  
     0.617
AFL89455.1
Hypothetical protein; PFAM: Family of unknown function (DUF490).
  
     0.614
AFL87807.1
Hypothetical protein.
  
     0.607
AFL86700.1
Hypothetical protein.
  
     0.599
AFL87923.1
Hypothetical protein.
  
     0.586
AFL89607.1
Hypothetical protein.
  
    0.572
AFL90173.1
Hypothetical protein.
  
     0.572
Your Current Organism:
Terriglobus roseus
NCBI taxonomy Id: 926566
Other names: T. roseus DSM 18391, Terriglobus roseus DSM 18391
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