STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL87941.1PFAM: von Willebrand factor type A domain; TIGRFAM: VWFA-related Acidobacterial domain. (383 aa)    
Predicted Functional Partners:
AFL87939.1
Hypothetical protein; Manually curated; non-canonical start codon.
 
     0.828
AFL86615.1
PFAM: Uncharacterized conserved protein (DUF2048).
  
     0.774
AFL88051.1
Hypothetical protein.
  
     0.774
AFL88504.1
PFAM: TonB-dependent Receptor Plug Domain.
  
     0.774
AFL88844.1
PFAM: TonB-dependent Receptor Plug Domain.
  
     0.774
AFL89196.1
PFAM: TonB-dependent Receptor Plug Domain.
  
     0.774
AFL86418.1
PFAM: Tetratricopeptide repeat.
  
     0.773
AFL87597.1
Hypothetical protein.
  
     0.773
AFL89527.1
Putative collagen-binding protein,TonB-dependent receptor family protein; PFAM: TonB-dependent Receptor Plug Domain; Cna protein B-type domain; manually curated.
  
     0.773
AFL86623.1
Hypothetical protein.
  
     0.772
Your Current Organism:
Terriglobus roseus
NCBI taxonomy Id: 926566
Other names: T. roseus DSM 18391, Terriglobus roseus DSM 18391
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.