Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFL86818.1 | AFL88109.1 | Terro_0477 | Terro_1816 | PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain. | EAL domain-containing protein; PFAM: EAL domain. | 0.817 |
AFL87091.1 | AFL88109.1 | Terro_0759 | Terro_1816 | PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | EAL domain-containing protein; PFAM: EAL domain. | 0.800 |
AFL87817.1 | AFL88109.1 | Terro_1510 | Terro_1816 | PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | EAL domain-containing protein; PFAM: EAL domain. | 0.801 |
AFL88109.1 | AFL86818.1 | Terro_1816 | Terro_0477 | EAL domain-containing protein; PFAM: EAL domain. | PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain. | 0.817 |
AFL88109.1 | AFL87091.1 | Terro_1816 | Terro_0759 | EAL domain-containing protein; PFAM: EAL domain. | PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | 0.800 |
AFL88109.1 | AFL87817.1 | Terro_1816 | Terro_1510 | EAL domain-containing protein; PFAM: EAL domain. | PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | 0.801 |
AFL88109.1 | AFL88198.1 | Terro_1816 | Terro_1908 | EAL domain-containing protein; PFAM: EAL domain. | PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain. | 0.825 |
AFL88109.1 | AFL89075.1 | Terro_1816 | Terro_2839 | EAL domain-containing protein; PFAM: EAL domain. | PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | 0.801 |
AFL88109.1 | AFL89200.1 | Terro_1816 | Terro_2968 | EAL domain-containing protein; PFAM: EAL domain. | PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | 0.809 |
AFL88109.1 | AFL89575.1 | Terro_1816 | Terro_3358 | EAL domain-containing protein; PFAM: EAL domain. | PFAM: GAF domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | 0.815 |
AFL88109.1 | AFL89738.1 | Terro_1816 | Terro_3524 | EAL domain-containing protein; PFAM: EAL domain. | PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | 0.808 |
AFL88109.1 | AFL90073.1 | Terro_1816 | Terro_3864 | EAL domain-containing protein; PFAM: EAL domain. | PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | 0.806 |
AFL88109.1 | AFL90246.1 | Terro_1816 | Terro_4038 | EAL domain-containing protein; PFAM: EAL domain. | PFAM: GGDEF domain; GAF domain; PAS fold; TIGRFAM: diguanylate cyclase (GGDEF) domain. | 0.857 |
AFL88198.1 | AFL88109.1 | Terro_1908 | Terro_1816 | PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain. | EAL domain-containing protein; PFAM: EAL domain. | 0.825 |
AFL88198.1 | AFL89575.1 | Terro_1908 | Terro_3358 | PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain. | PFAM: GAF domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | 0.497 |
AFL88198.1 | AFL90246.1 | Terro_1908 | Terro_4038 | PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain. | PFAM: GGDEF domain; GAF domain; PAS fold; TIGRFAM: diguanylate cyclase (GGDEF) domain. | 0.622 |
AFL89075.1 | AFL88109.1 | Terro_2839 | Terro_1816 | PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | EAL domain-containing protein; PFAM: EAL domain. | 0.801 |
AFL89200.1 | AFL88109.1 | Terro_2968 | Terro_1816 | PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | EAL domain-containing protein; PFAM: EAL domain. | 0.809 |
AFL89575.1 | AFL88109.1 | Terro_3358 | Terro_1816 | PFAM: GAF domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | EAL domain-containing protein; PFAM: EAL domain. | 0.815 |
AFL89575.1 | AFL88198.1 | Terro_3358 | Terro_1908 | PFAM: GAF domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain. | 0.497 |
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