STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
palOuter membrane protein/peptidoglycan-associated (lipo)protein; PFAM: OmpA family; TIGRFAM: peptidoglycan-associated lipoprotein; Belongs to the Pal lipoprotein family. (252 aa)    
Predicted Functional Partners:
AFL88268.1
Periplasmic component of the Tol biopolymer transport system; PFAM: WD40-like Beta Propeller Repeat; TolB amino-terminal domain; TIGRFAM: tol-pal system beta propeller repeat protein TolB.
 
 
 0.919
AFL88265.1
Biopolymer transport protein; PFAM: MotA/TolQ/ExbB proton channel family.
 
   
 0.845
AFL88266.1
PFAM: Biopolymer transport protein ExbD/TolR.
 
 
 
 0.835
AFL88609.1
Periplasmic component of the Tol biopolymer transport system; PFAM: WD40-like Beta Propeller Repeat; TolB amino-terminal domain; TIGRFAM: tol-pal system beta propeller repeat protein TolB.
 
 
 0.800
AFL88270.1
TIGRFAM: tol-pal system protein YbgF.
 
  
 0.783
AFL86576.1
Beta-barrel assembly machine subunit BamA; PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein.
  
 
 
 0.748
AFL88606.1
Biopolymer transport protein; PFAM: MotA/TolQ/ExbB proton channel family.
 
   
 0.745
AFL86417.1
PFAM: Biopolymer transport protein ExbD/TolR.
 
 
 
 0.716
AFL89457.1
PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein.
  
 
 
 0.715
AFL88607.1
PFAM: Biopolymer transport protein ExbD/TolR.
 
 
 
 0.713
Your Current Organism:
Terriglobus roseus
NCBI taxonomy Id: 926566
Other names: T. roseus DSM 18391, Terriglobus roseus DSM 18391
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.