STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL88758.1Hypothetical protein. (212 aa)    
Predicted Functional Partners:
AFL88755.1
PFAM: ATPase family associated with various cellular activities (AAA).
 
     0.927
AFL88757.1
Hypothetical protein.
 
     0.919
AFL88759.1
Hypothetical protein.
 
     0.914
AFL88760.1
Hypothetical protein.
 
     0.909
AFL88761.1
Hypothetical protein; PFAM: Phage-related baseplate assembly protein.
 
     0.906
AFL88762.1
Hypothetical protein.
 
     0.906
AFL88766.1
Hypothetical protein.
 
     0.900
AFL88763.1
Phage baseplate assembly protein W; PFAM: Gene 25-like lysozyme.
 
     0.896
AFL88764.1
PFAM: Baseplate J-like protein; TIGRFAM: conserved hypothetical protein, phage tail-like region.
 
     0.895
AFL88765.1
TIGRFAM: conserved hypothetical protein, phage tail-like region.
 
     0.895
Your Current Organism:
Terriglobus roseus
NCBI taxonomy Id: 926566
Other names: T. roseus DSM 18391, Terriglobus roseus DSM 18391
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.