STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL89334.1Hypothetical protein. (203 aa)    
Predicted Functional Partners:
AFL89335.1
Transcriptional regulator; PFAM: Ribbon-helix-helix protein, copG family.
       0.803
AFL89333.1
Hypothetical protein; Manually curated.
       0.773
AFL89332.1
Putative Zn peptidase; PFAM: Domain of unknown function (DUF955).
       0.570
AFL89336.1
tRNA nucleotidyltransferase (CCA-adding enzyme); PFAM: Nucleotidyltransferase domain.
       0.554
AFL89337.1
Hypothetical protein.
       0.539
AFL89338.1
Putative ATPase (AAA+ superfamily); PFAM: ATPase family associated with various cellular activities (AAA).
       0.539
AFL89339.1
Hypothetical protein.
       0.526
Your Current Organism:
Terriglobus roseus
NCBI taxonomy Id: 926566
Other names: T. roseus DSM 18391, Terriglobus roseus DSM 18391
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.