STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL89771.1Gas vesicle protein. (117 aa)    
Predicted Functional Partners:
AFL89772.1
Putative periplasmic or secreted lipoprotein; PFAM: Putative phospholipid-binding domain.
 
     0.667
AFL89770.1
Hypothetical protein.
       0.581
AFL87597.1
Hypothetical protein.
  
     0.523
AFL87966.1
Hypothetical protein.
  
     0.514
AFL89456.1
SurA-like protein; PFAM: SurA N-terminal domain.
  
     0.514
AFL87186.1
Hypothetical protein.
  
     0.497
AFL88386.1
Hypothetical protein.
  
     0.488
AFL88726.1
Hypothetical protein.
  
     0.488
AFL90244.1
Hypothetical protein.
  
     0.483
AFL87808.1
PFAM: BNR/Asp-box repeat.
  
     0.477
Your Current Organism:
Terriglobus roseus
NCBI taxonomy Id: 926566
Other names: T. roseus DSM 18391, Terriglobus roseus DSM 18391
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.