STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL90094.1Hypothetical protein; PFAM: Uncharacterized ACR, COG1430. (124 aa)    
Predicted Functional Partners:
AFL90097.1
Flp pilus assembly protein TadB; PFAM: Bacterial type II secretion system protein F domain.
 
     0.902
AFL90098.1
Flp pilus assembly protein, ATPase CpaF; PFAM: Type II/IV secretion system protein.
 
     0.898
AFL90096.1
Flp pilus assembly protein TadC; PFAM: Bacterial type II secretion system protein F domain.
 
     0.897
AFL90101.1
PFAM: SAF domain; TIGRFAM: Flp pilus assembly protein CpaB.
 
     0.892
AFL90093.1
PFAM: Predicted membrane protein (DUF2134).
 
     0.864
AFL90099.1
Flp pilus assembly protein, ATPase CpaE; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
 
     0.862
AFL90102.1
Flp pilus assembly protein, protease CpaA; PFAM: Type IV leader peptidase family.
 
     0.862
AFL90100.1
Flp pilus assembly protein, secretin CpaC; PFAM: Putative phospholipid-binding domain; Bacterial type II and III secretion system protein; Belongs to the bacterial secretin family.
 
     0.748
AFL90095.1
Hypothetical protein.
       0.714
AFL90091.1
PFAM: TadE-like protein.
       0.694
Your Current Organism:
Terriglobus roseus
NCBI taxonomy Id: 926566
Other names: T. roseus DSM 18391, Terriglobus roseus DSM 18391
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.