STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIC14525.1Drug/metabolite transporter superfamily protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter. (313 aa)    
Predicted Functional Partners:
AIC14524.1
Putative streptogramin lyase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.569
AIC14523.1
Hypothetical protein.
       0.520
aspC
Aspartate aminotransferase; Function of strongly homologous gene; enzyme.
     
 0.518
albA
DNA/RNA-binding protein Alba; Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes; Belongs to the histone-like Alba family.
 
     0.486
pheT
phenylalanine--tRNA ligase beta chain.
 
   0.414
AIC14682.1
T26-31p.
   
    0.408
trpS
tryptophan--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
    0.401
Your Current Organism:
Nitrososphaera viennensis
NCBI taxonomy Id: 926571
Other names: Candidatus Nitrososphaera sp. EN76, N. viennensis EN76, Nitrososphaera viennensis EN76, Nitrososphaera viennensis str. EN76, Nitrososphaera viennensis strain EN76
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.