STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIC15321.1hydroxyacyl-CoA dehydrogenase; Function of strongly homologous gene; enzyme. (382 aa)    
Predicted Functional Partners:
AIC16290.1
acetoacetyl-CoA thiolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
 0.996
AIC14689.1
acetoacetyl-CoA thiolase or ketoacyl-CoA thiolase; Function of strongly homologous gene; enzyme.
  
 0.995
AIC14389.1
Putative acyl-CoA dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 0.993
AIC15052.1
3-hydroxybutyryl-CoA dehydratase; Function of strongly homologous gene; enzyme; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.990
AIC15975.1
4-hydroxybutyryl-CoA dehydratase; Function of strongly homologous gene; enzyme.
    
 0.919
etfB
Putative electron transfer flavoprotein, subunit beta; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
  
 
 0.804
etfA
Putative electron transfer flavoprotein, subunit alpha; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
 
 
 0.786
fixC
Putative FAD-dependent, fixCX-like electron-transfer flavoprotein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
 
  
 0.763
rpl39e
50S ribosomal protein L39e; Function of strongly homologous gene; structure; Belongs to the eukaryotic ribosomal protein eL39 family.
       0.547
sdhB
FeS-center protein of succinate dehydrogenase/fumarate reductase; Function of strongly homologous gene; enzyme.
 
  
 0.538
Your Current Organism:
Nitrososphaera viennensis
NCBI taxonomy Id: 926571
Other names: Candidatus Nitrososphaera sp. EN76, N. viennensis EN76, Nitrososphaera viennensis EN76, Nitrososphaera viennensis str. EN76, Nitrososphaera viennensis strain EN76
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