STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIC15596.1Mn2+-dependent serine/threonine protein kinase. (253 aa)    
Predicted Functional Partners:
kae1
Putative glycoprotease family metalloendopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37; Belongs to the KAE1 / TsaD family.
   
 0.955
AIC14325.1
DUF367 domain-containing protein; Probable pre-rRNA processing protein involved in ribosome biogenesis; Belongs to the TSR3 family.
    0.898
AIC15595.1
Putative nucleoside-triphosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the HAM1 NTPase family.
 
     0.766
AIC15244.1
Hypothetical protein.
    
 
 0.673
NVIE_1383
GRAM domain-containing protein.
       0.659
rps15p
30S ribosomal protein S15p/S13e; Function of strongly homologous gene; structure.
 
   
 0.633
pcn
DNA polymerase sliding clamp; Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication.
 
   
 0.616
rps17p
30S ribosomal protein S17p; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
  
  
 0.604
rpoD
DNA-directed RNA polymerase, subunit D; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 
 0.598
aIF-2
Translation initiation factor IF-2; Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2.
 
  
 0.582
Your Current Organism:
Nitrososphaera viennensis
NCBI taxonomy Id: 926571
Other names: Candidatus Nitrososphaera sp. EN76, N. viennensis EN76, Nitrososphaera viennensis EN76, Nitrososphaera viennensis str. EN76, Nitrososphaera viennensis strain EN76
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