STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIC15843.1ABC uptake transporter, permease protein; Function of strongly homologous gene; transporter. (311 aa)    
Predicted Functional Partners:
AIC15844.1
ABC uptake transporter, permease protein; Function of strongly homologous gene; transporter.
 
0.999
yufO
ABC uptake transporter, ATP-binding protein; Function of strongly homologous gene; transporter.
 
 0.999
AIC15842.1
Putative ABC uptake transporter, substrate-binding protein/surface lipoprotein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
 
 0.980
AIC14949.1
Bmp family protein; Homologs of previously reported genes of unknown function.
 
 
 0.967
AIC15849.1
Putative carbamate kinase with BmpA-like periplasmic binding domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
  0.921
AIC16451.1
Putative amidohydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
    0.408
Your Current Organism:
Nitrososphaera viennensis
NCBI taxonomy Id: 926571
Other names: Candidatus Nitrososphaera sp. EN76, N. viennensis EN76, Nitrososphaera viennensis EN76, Nitrososphaera viennensis str. EN76, Nitrososphaera viennensis strain EN76
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