STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIC16011.1Putative signal peptidase I; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (188 aa)    
Predicted Functional Partners:
AIC16012.1
Putative uncharacterized protein family UPF0047; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.773
AIC14853.1
Putative peptidase M50; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.766
tbp
TATA-box-binding protein; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation.
 
    0.761
atpE
Archaeal A1A0-type ATP synthase, subunit E; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
  
 0.723
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
  
  
 0.715
lig
DNA ligase; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair.
    
 0.714
AIC16265.1
Exported protein of unknown function; No homology to any previously reported sequences.
  
 
 0.714
atpK
Archaeal A1A0-type ATP synthase, subunit K; Function of strongly homologous gene; enzyme.
    
 0.680
atpC
Archaeal A1A0-type ATP synthase, subunit C; Function of strongly homologous gene; enzyme.
    
 0.651
aspC
Aspartate aminotransferase; Function of strongly homologous gene; enzyme.
     
 0.644
Your Current Organism:
Nitrososphaera viennensis
NCBI taxonomy Id: 926571
Other names: Candidatus Nitrososphaera sp. EN76, N. viennensis EN76, Nitrososphaera viennensis EN76, Nitrososphaera viennensis str. EN76, Nitrososphaera viennensis strain EN76
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.