STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIC16788.1Hypothetical protein; Homologs of previously reported genes of unknown function. (275 aa)    
Predicted Functional Partners:
cca
CCA-adding enzyme; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate.
 
   
 0.819
AIC16787.1
Putative DNA-3-methyladenine glycosylase II; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.773
AIC16789.1
Putative Ser/Thr protein kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.773
NVIE_2576
Putative 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.
       0.773
AIC15281.1
Putative pyridoxamine 5'-phosphate oxidase, FMN-binding; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
    0.747
AIC15086.1
Putative phosphoesterase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.640
AIC15971.1
Protein of unknown function DUF373.
  
     0.583
dnaG
UPF0095 protein; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Also part of the exosome, which is a complex involved in RNA degradation. Acts as a poly(A)-binding protein that enhances the interaction between heteropolymeric, adenine-rich transcripts and the exosome.
  
     0.581
AIC16792.1
Hypothetical protein.
       0.549
AIC16084.1
Putative PUA domain protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.497
Your Current Organism:
Nitrososphaera viennensis
NCBI taxonomy Id: 926571
Other names: Candidatus Nitrososphaera sp. EN76, N. viennensis EN76, Nitrososphaera viennensis EN76, Nitrososphaera viennensis str. EN76, Nitrososphaera viennensis strain EN76
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.