STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
coxBPutative heme-copper oxidase subunit II; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (163 aa)    
Predicted Functional Partners:
coxA2
Heme-copper oxidase subunit I; Function of strongly homologous gene; enzyme.
 
 0.999
petB
Putative cytochrome b/b6; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
 
 
 0.999
coxA1
Heme-copper oxidase subunit I; Function of strongly homologous gene; enzyme.
 
 0.999
nuoH
NADH-quinone oxidoreductase subunit H; Function of strongly homologous gene; membrane component.
  
 
 0.995
ctaB-1
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
 
 0.979
ctaB-2
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
 
 0.977
nuoA
NADH-quinone oxidoreductase subunit A; Function of strongly homologous gene; membrane component.
   
 
 0.935
nuoN
NADH-quinone oxidoreductase subunit N; Function of strongly homologous gene; membrane component.
  
 
 0.902
ctaA
Putative cytochrome oxidase assembly protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
  
 0.886
nuoD
NADH-quinone oxidoreductase subunit D; Function of strongly homologous gene; membrane component; Belongs to the complex I 49 kDa subunit family.
   
 
 0.875
Your Current Organism:
Nitrososphaera viennensis
NCBI taxonomy Id: 926571
Other names: Candidatus Nitrososphaera sp. EN76, N. viennensis EN76, Nitrososphaera viennensis EN76, Nitrososphaera viennensis str. EN76, Nitrososphaera viennensis strain EN76
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