STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIP91_011218Amidohydro_3 domain-containing protein. (623 aa)    
Predicted Functional Partners:
RPB2
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.566
RPB5
DNA-directed RNA polymerases II 24 kDa polypeptide (RNA polymerase II subunit 5).
    
  0.561
RPB8
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
  0.561
RPB7
DNA-directed RNA polymerase II subunit.
    
  0.561
RPB3
45 kDa subunit of RNA polymerase II.
    
  0.536
RPB11
DNA-directed RNA polymerase II core subunit.
    
  0.525
RPB4
RNA polymerase B.
    
  0.513
EIP91_006981
DRMBL domain-containing protein.
    
 0.508
YSH1
Endoribonuclease ysh1.
    
 0.508
EIP91_008630
Uncharacterized protein.
    
 0.508
Your Current Organism:
Steccherinum ochraceum
NCBI taxonomy Id: 92696
Other names: S. ochraceum
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