STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIP91_002593Uncharacterized protein. (1262 aa)    
Predicted Functional Partners:
EIP91_010633
WD_REPEATS_REGION domain-containing protein.
    
 0.999
SKI3
Superkiller protein 3.
   
 0.999
RRP4
Exosome non-catalytic core subunit rrp4.
   
 0.966
EIP91_000168
Uncharacterized protein.
    
 0.966
EIP91_000191
RNase_PH domain-containing protein.
   
 0.959
CSL4
Exosome 3'->5 exonuclease subunit ski4 (Csl4).
   
 0.956
RRP46
Exosome non-catalytic core subunit rrp46.
    
 0.949
SKI6
Exosome non-catalytic core component.
    
 0.947
RRP40
Exosome non-catalytic core subunit rrp40.
   
 0.946
EIP91_004334
RNase_PH domain-containing protein.
   
 0.944
Your Current Organism:
Steccherinum ochraceum
NCBI taxonomy Id: 92696
Other names: S. ochraceum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.