STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIP91_000829Uncharacterized protein. (824 aa)    
Predicted Functional Partners:
UFD1
Ubiquitin fusion degradation protein.
   
 
 0.976
NPL4
Nuclear protein localization protein 4.
   
 
 0.976
OTU1
Ubiquitin-specific protease otu1.
    
 
 0.972
EIP91_000141
Uncharacterized protein.
    
 
 0.970
EIP91_005884
UBX domain-containing protein.
   
 
 0.929
SPT23
SPT3 Dosage dependent suppressor of Ty-induced promoter mutations-like protein.
    
   0.868
CDC48_1
AAA ATPase cdc48.
   
 
 0.865
EIP91_005592
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 
 0.865
CDC48_3
AAA ATPase cdc48.
   
 
 0.865
CDC48_2
AAA ATPase cdc48; Belongs to the AAA ATPase family.
   
 
 0.865
Your Current Organism:
Steccherinum ochraceum
NCBI taxonomy Id: 92696
Other names: S. ochraceum
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.