STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIP91_007343Uncharacterized protein. (369 aa)    
Predicted Functional Partners:
EIP91_005292
AAA domain-containing protein.
   
 0.999
RFC5
Replication factor C (RF-C) subunit.
   
 0.987
POL2
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
   
 0.970
EIP91_007090
AAA domain-containing protein.
   
 0.966
RFC4
Replication factor C subunit 4.
   
 0.965
RFC3
Subunit of heteropentameric Replication factor C (RF-C).
   
 0.957
POL1
DNA polymerase.
   
 0.916
POL3
DNA polymerase.
   
 0.908
EIP91_004540
DNA primase; Belongs to the eukaryotic-type primase small subunit family.
   
 
 0.905
RAD17
Cell cycle checkpoint protein rad17.
   
 0.898
Your Current Organism:
Steccherinum ochraceum
NCBI taxonomy Id: 92696
Other names: S. ochraceum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.