STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDA1_1Severe Depolymerization of Actin. (277 aa)    
Predicted Functional Partners:
RAB11A
Ras-protein Rab-11A.
   
 0.881
SPC98
Spindle pole body component.
    
 
 0.857
TUB4
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
    
 0.854
STU2
Stu2 protein.
   
 0.840
EIP91_004258
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 0.816
SED5
Cis-Golgi t-SNARE syntaxin.
    
 0.815
EIP91_008766
Protein kinase domain-containing protein.
    
 
 0.812
MYO2
Myosin type-2 heavy chain 1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.796
EIP91_007018
Uncharacterized protein.
   
 0.759
CDC5
Serine/threonine-protein kinase.
   
 0.750
Your Current Organism:
Steccherinum ochraceum
NCBI taxonomy Id: 92696
Other names: S. ochraceum
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