EIP91_006439 protein (Steccherinum ochraceum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

EIP91_006439

Uncharacterized protein. (93 aa)

Predicted Functional Partners:

EIP91_011397

0.967

EIP91_009644

0.967

EIP91_008491

0.956

EIP91_008874

0.954

EIP91_004732

0.911

NUO49

0.892

EIP91_009014

0.890

EIP91_000470

0.887

EIP91_008923

0.886

EIP91_003944

0.870

Your Current Organism:

Steccherinum ochraceum

NCBI taxonomy Id: 92696
Other names: S. ochraceum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EIP91_000470	EIP91_003944	A0A4R0RFM6	A0A4R0RUN2	Uncharacterized protein; Belongs to the complex I LYR family.	Uncharacterized protein.	0.999
EIP91_000470	EIP91_004732	A0A4R0RFM6	A0A4R0RBC7	Uncharacterized protein; Belongs to the complex I LYR family.	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.999
EIP91_000470	EIP91_006439	A0A4R0RFM6	A0A4V2MVJ3	Uncharacterized protein; Belongs to the complex I LYR family.	Uncharacterized protein.	0.887
EIP91_000470	EIP91_008491	A0A4R0RFM6	A0A4R0RSA6	Uncharacterized protein; Belongs to the complex I LYR family.	Uncharacterized protein.	0.999
EIP91_000470	EIP91_008874	A0A4R0RFM6	A0A4R0RV65	Uncharacterized protein; Belongs to the complex I LYR family.	Uncharacterized protein.	0.999
EIP91_000470	EIP91_008923	A0A4R0RFM6	A0A4R0RWD0	Uncharacterized protein; Belongs to the complex I LYR family.	zf-CHCC domain-containing protein.	0.999
EIP91_000470	EIP91_009014	A0A4R0RFM6	A0A4R0RC02	Uncharacterized protein; Belongs to the complex I LYR family.	Uncharacterized protein.	0.999
EIP91_000470	EIP91_009644	A0A4R0RFM6	A0A4V2MV21	Uncharacterized protein; Belongs to the complex I LYR family.	Uncharacterized protein.	0.975
EIP91_000470	EIP91_011397	A0A4R0RFM6	A0A4R0R831	Uncharacterized protein; Belongs to the complex I LYR family.	Uncharacterized protein.	0.772
EIP91_000470	NUO49	A0A4R0RFM6	A0A4R0RN87	Uncharacterized protein; Belongs to the complex I LYR family.	NADH:ubiquinone oxidoreductase 49kD subunit; Belongs to the complex I 49 kDa subunit family.	0.999
EIP91_003944	EIP91_000470	A0A4R0RUN2	A0A4R0RFM6	Uncharacterized protein.	Uncharacterized protein; Belongs to the complex I LYR family.	0.999
EIP91_003944	EIP91_004732	A0A4R0RUN2	A0A4R0RBC7	Uncharacterized protein.	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.999
EIP91_003944	EIP91_006439	A0A4R0RUN2	A0A4V2MVJ3	Uncharacterized protein.	Uncharacterized protein.	0.870
EIP91_003944	EIP91_008491	A0A4R0RUN2	A0A4R0RSA6	Uncharacterized protein.	Uncharacterized protein.	0.999
EIP91_003944	EIP91_008874	A0A4R0RUN2	A0A4R0RV65	Uncharacterized protein.	Uncharacterized protein.	0.993
EIP91_003944	EIP91_008923	A0A4R0RUN2	A0A4R0RWD0	Uncharacterized protein.	zf-CHCC domain-containing protein.	0.999
EIP91_003944	EIP91_009014	A0A4R0RUN2	A0A4R0RC02	Uncharacterized protein.	Uncharacterized protein.	0.999
EIP91_003944	EIP91_009644	A0A4R0RUN2	A0A4V2MV21	Uncharacterized protein.	Uncharacterized protein.	0.694
EIP91_003944	EIP91_011397	A0A4R0RUN2	A0A4R0R831	Uncharacterized protein.	Uncharacterized protein.	0.798
EIP91_003944	NUO49	A0A4R0RUN2	A0A4R0RN87	Uncharacterized protein.	NADH:ubiquinone oxidoreductase 49kD subunit; Belongs to the complex I 49 kDa subunit family.	0.998