STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF02991.1Tryptophan synthase alpha chain. (1083 aa)    
Predicted Functional Partners:
AKF02990.1
Hypothetical protein.
 
    
0.833
AKF07054.1
TPR domain protein, putative component of TonB system.
 
 
 
 0.783
AKF09433.1
Tryptophan synthase alpha chain.
  
     0.774
AKF10797.1
Hypothetical protein.
  
     0.773
AKF09359.1
Microbial collagenase secreted protein.
  
     0.766
AKF09344.1
Multiple EGF-like-domain protein 3 precursor.
  
     0.760
AKF05930.1
Peptidase, S41 family.
  
     0.758
AKF07989.1
DNA polymerase III alpha subunit.
  
     0.758
AKF06889.1
TPR domain protein, putative component of TonB system.
  
 
   0.757
AKF05470.1
Hypothetical protein.
  
 
   0.754
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.