STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF03044.1Putative secreted protein. (255 aa)    
Predicted Functional Partners:
AKF03045.1
Hypothetical protein.
       0.773
AKF10136.1
Hypothetical protein.
  
     0.653
AKF03042.1
DNA-binding response regulator ChvI.
       0.584
AKF03043.1
Phosphate regulon sensor protein PhoR.
       0.584
AKF03041.1
Hypothetical protein.
  
    0.571
AKF03046.1
Hypothetical protein.
       0.554
AKF09288.1
Hemagglutinin protein.
  
     0.516
AKF04742.1
Hypothetical protein.
    
   0.509
AKF11113.1
Cysteine desulfurase.
    
   0.509
AKF03047.1
Hypothetical protein.
       0.455
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.