STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF03228.1Radical SAM domain heme biosynthesis protein. (766 aa)    
Predicted Functional Partners:
AKF03208.1
Arylsulfatase regulator.
 
  
 0.791
AKF07340.1
Fatty acid desaturase.
 
     0.770
AKF11710.1
UDP-glucose 4-epimerase.
 
   
 0.754
AKF10797.1
Hypothetical protein.
  
     0.750
AKF04668.1
Putative lipoprotein signal peptide.
  
     0.740
AKF09344.1
Multiple EGF-like-domain protein 3 precursor.
 
     0.738
AKF09359.1
Microbial collagenase secreted protein.
  
     0.737
AKF08544.1
Hypothetical protein.
 
     0.735
AKF03229.1
Molybdopterin-based tungsten cofactor biosynthesis protein.
 
  
0.725
AKF04699.1
Hypothetical protein.
 
  
 0.713
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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