STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF03238.1Hypothetical protein. (116 aa)    
Predicted Functional Partners:
AKF03239.1
Copper tolerance protein.
       0.773
AKF03236.1
Radical SAM domain protein.
       0.732
AKF03237.1
Hypothetical protein.
       0.732
AKF03240.1
Multicopper oxidase.
       0.727
AKF03234.1
Hypothetical protein.
       0.697
AKF03235.1
Molybdenum cofactor biosynthesis protein MoaA.
       0.697
AKF03233.1
Radical SAM domain heme biosynthesis protein.
       0.549
AKF03241.1
Tryptophan synthase alpha chain.
       0.530
AKF03232.1
Hypothetical protein.
       0.452
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.