STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF03668.1Tryptophan synthase alpha chain. (1163 aa)    
Predicted Functional Partners:
AKF03669.1
Tryptophan synthase alpha chain.
 
    
0.831
AKF03469.1
Tryptophan synthase alpha chain.
  
     0.775
AKF11118.1
Hypothetical protein.
  
     0.771
AKF10596.1
Serine/threonine protein kinase.
  
     0.767
AKF05068.1
Hydroxyacylglutathione hydrolase.
  
     0.765
AKF07569.1
PHP domain protein.
  
     0.765
AKF09776.1
Hypothetical protein.
  
     0.760
AKF03098.1
Hypothetical protein.
  
     0.746
AKF05349.1
Hypothetical protein.
  
     0.744
AKF03236.1
Radical SAM domain protein.
 
     0.743
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.