STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF03712.1Flp pilus assembly protein RcpC/CpaB. (255 aa)    
Predicted Functional Partners:
AKF03714.1
Type II/IV secretion system protein TadC, associated with Flp pilus assembly.
 
  
 0.969
AKF03713.1
Flp pilus assembly protein TadB.
 
  
 0.968
AKF05220.1
Type IV prepilin peptidase TadV/CpaA.
 
  
 0.887
AKF08309.1
Type II/IV secretion system protein TadC, associated with Flp pilus assembly.
 
  
 0.885
AKF05227.1
Type II/IV secretion system protein TadC, associated with Flp pilus assembly.
 
  
 0.884
AKF05226.1
Flp pilus assembly protein TadB.
 
  
 0.882
AKF08308.1
Flp pilus assembly protein TadB.
 
  
 0.882
AKF11663.1
Flp pilus assembly protein TadB.
 
  
 0.882
AKF11664.1
Type II/IV secretion system protein TadC, associated with Flp pilus assembly.
 
  
 0.879
AKF11667.1
Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily.
 
  
 0.878
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.