STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF03910.1Response regulator of zinc sigma-54-dependent two-component system. (475 aa)    
Predicted Functional Partners:
AKF07544.1
RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.716
AKF06495.1
Sensor histidine kinase.
 
 
 0.624
AKF03911.1
Hypothetical protein.
       0.610
AKF05030.1
Flagellar sensor histidine kinase FleS.
  
 
 
 0.537
AKF08493.1
Flagellar sensor histidine kinase FleS.
 
 
   0.522
AKF06382.1
Flagellar sensor histidine kinase FleS.
 
   0.494
AKF03909.1
Hypothetical protein.
       0.491
AKF05987.1
Methyl-accepting chemotaxis protein.
  
 
 0.490
AKF09012.1
Flagellar sensor histidine kinase FleS.
 
 
   0.482
AKF07783.1
Flagellar sensor histidine kinase FleS.
  
 
   0.475
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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