STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF03942.1SAM-dependent methyltransferase. (271 aa)    
Predicted Functional Partners:
AKF03943.1
Hypothetical protein.
       0.773
AKF09229.1
SAM-dependent methyltransferase.
 
   
 0.593
AKF08720.1
Methyltransferase.
 
   
 0.560
AKF08186.1
Methyltransferase.
  
     0.541
AKF04307.1
Methyltransferase type 11.
 
   
 0.527
AKF03941.1
Hypothetical protein.
       0.497
AKF07185.1
Non-ribosomal peptide synthase.
  
  
 0.472
AKF05204.1
Omega-3 polyunsaturated fatty acid synthase subunit, PfaB; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
     
 0.464
AKF09590.1
Putative methyltransferase.
 
   
 0.445
AKF06115.1
Chaperone protein DnaJ.
  
    0.443
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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