STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF03961.1Hypothetical protein. (300 aa)    
Predicted Functional Partners:
AKF10563.1
Hypothetical protein.
  
     0.683
AKF04159.1
Hypothetical protein.
  
     0.554
AKF03960.1
Hypothetical protein.
       0.533
AKF04500.1
Hypothetical protein.
  
     0.483
AKF10124.1
Major facilitator superfamily (MFS) transport protein.
  
     0.475
AKF05400.1
Hypothetical protein.
 
 
   0.473
AKF10591.1
TonB family protein / TonB-dependent receptor.
  
     0.461
rlpA
Rare lipoprotein A precursor; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.
 
   0.454
AKF09336.1
TonB family protein / TonB-dependent receptor.
  
     0.453
AKF09385.1
TonB family protein / TonB-dependent receptor.
  
     0.443
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.