STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF03982.1Ribonuclease BN. (345 aa)    
Predicted Functional Partners:
AKF03037.1
Hydrolase, haloacid dehalogenase-like family.
      0.894
AKF03983.1
Hypothetical protein.
       0.752
AKF06362.1
Hypothetical protein.
 
     0.709
AKF03981.1
Hypothetical protein.
       0.705
AKF06364.1
Hypothetical protein.
 
     0.673
AKF10127.1
Hypothetical protein.
 
     0.557
AKF03182.1
Phospholipase D/Transphosphatidylase.
 
    0.535
AKF11680.1
Hypothetical protein.
  
     0.527
AKF03980.1
DNA polymerase III subunits gamma and tau.
       0.526
AKF06363.1
Putative integral membrane protein.
 
     0.509
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.