STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF04044.1Sensory box histidine kinase/response regulator. (481 aa)    
Predicted Functional Partners:
AKF08570.1
Chemotaxis regulator.
 
   0.819
AKF03495.1
Hypothetical protein.
 
 
0.818
AKF08562.1
Chemotaxis regulator.
 
   0.814
AKF07353.1
Chemotaxis regulator.
 
   0.804
AKF10397.1
Putative two component system response regulator.
 
   0.801
AKF07216.1
Phosphate regulon transcriptional regulatory protein PhoB.
 
   0.800
AKF04008.1
Chemotaxis protein methyltransferase CheR.
 
   0.797
AKF10186.1
Two-component sensor PilS.
 
   0.794
AKF10195.1
Signal transduction response regulator.
  
 
 
 0.791
AKF08279.1
Phosphate regulon transcriptional regulatory protein PhoB.
  
   0.773
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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