STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF04217.1Sensory box histidine kinase/response regulator. (758 aa)    
Predicted Functional Partners:
AKF03653.1
Chemotaxis protein methyltransferase CheR.
 
 
0.989
AKF03495.1
Hypothetical protein.
 
 
0.988
AKF10101.1
Chemotaxis protein methyltransferase CheR.
 
 
0.988
AKF05696.1
Putative SigmaB asociated two-component system sensor protein.
 
 
0.986
AKF10740.1
Two-component hybrid sensor and regulator.
 
 
0.981
AKF03938.1
Chemotaxis protein methyltransferase CheR.
 
 
0.980
AKF10177.1
Chemotaxis protein methyltransferase CheR.
 
 
0.980
AKF03081.1
Sensory box histidine kinase/response regulator.
 
 
0.978
AKF08626.1
Two-component hybrid sensor and regulator.
 
 
0.971
AKF05697.1
Chemotaxis regulator.
 
 
0.961
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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