STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF04274.1Hypothetical protein. (339 aa)    
Predicted Functional Partners:
AKF11566.1
Hypothetical protein.
  
     0.704
AKF05349.1
Hypothetical protein.
  
     0.685
AKF03236.1
Radical SAM domain protein.
  
     0.684
AKF05628.1
Hypothetical protein.
  
     0.684
AKF10522.1
Methanol oxidation glmU-like protein.
  
     0.678
AKF03747.1
Pentalenene synthase.
  
    0.667
AKF05124.1
Hypothetical protein.
  
     0.621
AKF03105.1
Tryptophan synthase alpha chain.
  
    0.609
AKF03555.1
Sterol desaturase family protein.
 
     0.605
AKF05668.1
BNR repeat domain protein.
  
     0.586
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.