STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF04379.1Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family. (539 aa)    
Predicted Functional Partners:
AKF04381.1
Periplasmic aromatic aldehyde oxidoreductase, FAD binding subunit YagS.
 
  
 0.980
AKF04382.1
Periplasmic aromatic aldehyde oxidoreductase, iron-sulfur subunit YagT.
 
  
 0.974
AKF04380.1
Periplasmic aromatic aldehyde oxidoreductase, molybdenum binding subunit YagR.
 
  
 0.967
AKF07184.1
Isoquinoline 1-oxidoreductase alpha subunit.
 
  
 0.893
AKF09421.1
Isoquinoline 1-oxidoreductase beta subunit.
 
  
 0.889
AKF07183.1
CTP molybdopterin cytidylyltransferase.
 
  
 0.842
AKF11257.1
Xanthine dehydrogenase iron-sulfur subunit.
 
  
 0.712
AKF04377.1
3-oxoacyl-[acyl-carrier protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.697
AKF04378.1
Hypothetical protein.
       0.697
AKF11252.1
Xanthine dehydrogenase, molybdenum binding subunit.
 
  
 0.673
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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