STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF04588.1Hypothetical protein. (198 aa)    
Predicted Functional Partners:
AKF05564.1
Glycine-rich protein.
  
     0.648
AKF04587.1
Hypothetical protein.
       0.639
AKF04586.1
Rod shape-determining protein MreB.
       0.622
AKF09593.1
Hypothetical protein.
  
     0.580
AKF10534.1
Hypothetical protein.
  
     0.518
AKF08005.1
1,4-dihydroxy-2-naphthoate polyprenyltransferase.
  
     0.513
AKF04589.1
Putative sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
       0.511
AKF04590.1
Putative iron siderophore sensor protein.
       0.511
AKF09864.1
Hypothetical protein.
 
     0.509
AKF10162.1
Adenylate cyclase.
  
     0.488
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.