STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF04635.1Internalin. (708 aa)    
Predicted Functional Partners:
AKF04636.1
Kazal-type serine protease inhibitor domain protein.
       0.773
AKF02953.1
Thrombospondin-1 precursor.
  
     0.756
AKF04637.1
tolB protein precursor.
  
    0.727
AKF09199.1
OmpA domain protein.
  
 
   0.609
AKF05772.1
Flagellar motor rotation protein MotB.
  
 
   0.582
AKF04638.1
Cell division transporter, ATP-binding protein FtsE.
       0.565
AKF04639.1
ABC transporter, permease protein.
       0.565
AKF04640.1
Hypothetical protein.
       0.565
AKF04641.1
ABC-type transport protein.
       0.565
AKF04642.1
Hypothetical protein.
       0.565
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.