STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF04647.1Secreted trypsin-like serine protease. (608 aa)    
Predicted Functional Partners:
AKF05004.1
Lysyl oxidase.
  
     0.717
AKF04648.1
Hypothetical protein.
 
    
0.686
AKF06167.1
Tryptophan synthase alpha chain.
  
     0.669
AKF08445.1
Tryptophan synthase alpha chain.
  
     0.626
AKF10464.1
Hypothetical protein.
  
     0.626
AKF09919.1
Hypothetical protein.
  
     0.590
AKF10526.1
Putative membrane protein.
  
     0.586
AKF03565.1
Putative Rhs protein.
  
     0.579
AKF04646.1
Hypothetical protein.
       0.566
AKF03175.1
Hypothetical protein.
  
     0.564
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.