STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF04699.1Hypothetical protein. (450 aa)    
Predicted Functional Partners:
AKF03208.1
Arylsulfatase regulator.
 
   
 0.760
AKF03228.1
Radical SAM domain heme biosynthesis protein.
 
  
 0.713
AKF03203.1
Radical SAM domain heme biosynthesis protein.
  
     0.566
AKF03224.1
Radical SAM domain heme biosynthesis protein.
  
     0.559
AKF04698.1
TPR repeat protein.
       0.553
AKF09359.1
Microbial collagenase secreted protein.
  
     0.537
AKF09344.1
Multiple EGF-like-domain protein 3 precursor.
  
     0.486
AKF02990.1
Hypothetical protein.
  
    0.475
AKF02991.1
Tryptophan synthase alpha chain.
  
     0.430
AKF04900.1
Hypothetical protein.
  
     0.425
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.