STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF05503.1Trp repressor binding protein; Belongs to the WrbA family. (202 aa)    
Predicted Functional Partners:
AKF10994.1
NAD(P)H dehydrogenase, quinone family.
    
 0.921
AKF11430.1
CrtT-methyltransferase-like protein.
     
  0.900
ubiE
2-heptaprenyl-1,4-naphthoquinone methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).
     
  0.900
AKF05502.1
Pirin; Belongs to the pirin family.
       0.799
AKF04420.1
Alpha,alpha-trehalose-phosphate synthase.
   
    0.731
AKF06555.1
Alpha,alpha-trehalose-phosphate synthase.
   
    0.731
AKF08771.1
Alpha,alpha-trehalose-phosphate synthase.
   
    0.731
AKF03824.1
Fructose-bisphosphate aldolase class I.
   
    0.727
AKF05501.1
Tryptophan synthase alpha chain.
       0.718
AKF04399.1
Non-specific DNA-binding protein Dps; Belongs to the Dps family.
  
  
 0.654
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.