STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF05568.1Late competence protein ComEA, DNA receptor. (147 aa)    
Predicted Functional Partners:
AKF07564.1
Competence protein ComEC/Rec2-related protein.
 
  
 0.643
AKF05567.1
Hypothetical protein.
       0.587
AKF03915.1
Type IV fimbrial assembly protein PilC.
  
  
 0.536
AKF07142.1
Type IV fimbrial assembly protein PilC.
  
  
 0.536
AKF06787.1
Leader peptidase (Prepilin peptidase); Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
   
  
 0.511
AKF11655.1
Type IV prepilin peptidase TadV/CpaA.
   
  
 0.511
AKF10654.1
Single-stranded DNA-binding protein.
  
  
 0.446
AKF03787.1
General secretion pathway protein G.
  
  
 0.432
AKF03917.1
General secretion pathway protein G.
  
  
 0.432
AKF03919.1
General secretion pathway protein I.
  
  
 0.432
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.